Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox17Q61473 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox17Q61473 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox17Q61473 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.72□□□□□ -0.37
Sox17Q61473 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox17Q61473 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox17Q61473 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox17Q61473 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox17Q61473 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox17Q61473 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm10819-201ENSMUST00000099988 561 ntBASIC12.72□□□□□ -0.37
Sox17Q61473 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.72□□□□□ -0.37
Sox17Q61473 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox17Q61473 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox17Q61473 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.71□□□□□ -0.37
Sox17Q61473 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.71□□□□□ -0.37
Sox17Q61473 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.71□□□□□ -0.37
Sox17Q61473 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox17Q61473 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 Gm6222-201ENSMUST00000120787 396 ntBASIC12.71□□□□□ -0.37
Sox17Q61473 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox17Q61473 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox17Q61473 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox17Q61473 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox17Q61473 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Sox17Q61473 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.71□□□□□ -0.38
Sox17Q61473 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sox17Q61473 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox17Q61473 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.71□□□□□ -0.38
Sox17Q61473 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Sox17Q61473 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox17Q61473 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms