Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm28760-201ENSMUST00000185995 736 ntBASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Gm5279-201ENSMUST00000199575 745 ntBASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Matn2-206ENSMUST00000228570 2798 ntBASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdkl5Q3UTQ8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdkl5Q3UTQ8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Gm22189-201ENSMUST00000103822 86 ntBASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Gm17330-201ENSMUST00000221047 165 ntBASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl5Q3UTQ8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdkl5Q3UTQ8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms