Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Gm27572-201ENSMUST00000183702 255 ntBASIC16.12■□□□□ 0.17
Spg7Q3ULF4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg7Q3ULF4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gm27682-201ENSMUST00000183930 110 ntBASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Mir6420-201ENSMUST00000185032 102 ntBASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.11■□□□□ 0.17
Spg7Q3ULF4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.11■□□□□ 0.17
Spg7Q3ULF4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Spg7Q3ULF4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Spg7Q3ULF4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms