Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox9Q04887 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox9Q04887 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sox9Q04887 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm12217-201ENSMUST00000118858 696 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Gm14726-201ENSMUST00000120623 896 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Gm13123-201ENSMUST00000122173 492 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Gm2231-201ENSMUST00000125661 612 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox9Q04887 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm3890-201ENSMUST00000182416 207 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Mir6927-201ENSMUST00000184494 71 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.98□□□□□ -0.17
Sox9Q04887 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.98□□□□□ -0.17
Sox9Q04887 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox9Q04887 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox9Q04887 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox9Q04887 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox9Q04887 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox9Q04887 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox9Q04887 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox9Q04887 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox9Q04887 Gm8805-201ENSMUST00000117848 313 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Gm7857-201ENSMUST00000117957 358 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox9Q04887 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox9Q04887 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Gm43378-201ENSMUST00000199336 582 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Gm17330-201ENSMUST00000221047 165 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox9Q04887 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox9Q04887 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox9Q04887 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox9Q04887 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.97□□□□□ -0.17
Sox9Q04887 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox9Q04887 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.96□□□□□ -0.17
Sox9Q04887 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox9Q04887 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms