Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.53□□□□□ -0.4
Cacna1aP97445 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.53□□□□□ -0.4
Cacna1aP97445 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Gm7046-201ENSMUST00000221351 977 ntBASIC12.53□□□□□ -0.4
Cacna1aP97445 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.53□□□□□ -0.4
Cacna1aP97445 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1aP97445 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cacna1aP97445 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cacna1aP97445 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cacna1aP97445 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.52□□□□□ -0.4
Cacna1aP97445 Gm11618-201ENSMUST00000117946 267 ntBASIC12.52□□□□□ -0.4
Cacna1aP97445 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.52□□□□□ -0.4
Cacna1aP97445 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cacna1aP97445 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1aP97445 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cacna1aP97445 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.52□□□□□ -0.41
Cacna1aP97445 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.52□□□□□ -0.41
Cacna1aP97445 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cacna1aP97445 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Cacna1aP97445 Gm4909-201ENSMUST00000118749 794 ntBASIC12.51□□□□□ -0.41
Cacna1aP97445 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.51□□□□□ -0.41
Cacna1aP97445 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.51□□□□□ -0.41
Cacna1aP97445 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cacna1aP97445 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms