Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.96■□□□□ 0.31
Nkx2-3P97334 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-3P97334 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Nkx2-3P97334 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-3P97334 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-3P97334 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm15808-201ENSMUST00000119046 604 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm16379-201ENSMUST00000161469 348 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm8762-201ENSMUST00000193486 339 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.95■□□□□ 0.3
Nkx2-3P97334 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-3P97334 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Gm13316-201ENSMUST00000140537 691 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nkx2-3P97334 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 Gm7046-201ENSMUST00000221351 977 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.94■□□□□ 0.3
Nkx2-3P97334 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-3P97334 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.94■□□□□ 0.3
Nkx2-3P97334 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Gm11637-201ENSMUST00000120601 592 ntBASIC16.93■□□□□ 0.3
Nkx2-3P97334 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Gm17376-201ENSMUST00000166016 84 ntBASIC16.93■□□□□ 0.3
Nkx2-3P97334 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-3P97334 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Gm12241-201ENSMUST00000118330 726 ntBASIC16.92■□□□□ 0.3
Nkx2-3P97334 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.92■□□□□ 0.3
Nkx2-3P97334 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-3P97334 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms