Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12□□□□□ -0.49
Sec61a1P61620 Gm13823-201ENSMUST00000119930 345 ntBASIC12□□□□□ -0.49
Sec61a1P61620 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Gm17837-201ENSMUST00000186435 985 ntBASIC12□□□□□ -0.49
Sec61a1P61620 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Sec61a1P61620 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sec61a1P61620 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a1P61620 Ssr1-203ENSMUST00000225246 1825 ntBASIC12□□□□□ -0.49
Sec61a1P61620 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Gm14057-201ENSMUST00000120631 482 ntBASIC11.99□□□□□ -0.49
Sec61a1P61620 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Gm8584-201ENSMUST00000171982 758 ntBASIC11.99□□□□□ -0.49
Sec61a1P61620 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Mir7023-201ENSMUST00000185093 64 ntBASIC11.99□□□□□ -0.49
Sec61a1P61620 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sec61a1P61620 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.99□□□□□ -0.49
Sec61a1P61620 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sec61a1P61620 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a1P61620 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.98□□□□□ -0.49
Sec61a1P61620 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.98□□□□□ -0.49
Sec61a1P61620 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm28630-201ENSMUST00000187806 498 ntBASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.98□□□□□ -0.49
Sec61a1P61620 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.98□□□□□ -0.49
Sec61a1P61620 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms