Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm14701-201ENSMUST00000117156 348 ntBASIC12.3□□□□□ -0.44
Rfx3P48381 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm27622-201ENSMUST00000183779 60 ntBASIC12.3□□□□□ -0.44
Rfx3P48381 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.3□□□□□ -0.44
Rfx3P48381 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm6916-202ENSMUST00000205523 195 ntBASIC12.3□□□□□ -0.44
Rfx3P48381 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rfx3P48381 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rfx3P48381 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx3P48381 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfx3P48381 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfx3P48381 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.29□□□□□ -0.44
Rfx3P48381 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.29□□□□□ -0.44
Rfx3P48381 Gm28630-201ENSMUST00000187806 498 ntBASIC12.29□□□□□ -0.44
Rfx3P48381 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rfx3P48381 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.29□□□□□ -0.44
Rfx3P48381 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfx3P48381 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.29□□□□□ -0.44
Rfx3P48381 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfx3P48381 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rfx3P48381 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rfx3P48381 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfx3P48381 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rfx3P48381 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 Gm15653-201ENSMUST00000119247 907 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Mir1897-201ENSMUST00000122581 272 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Rfx3P48381 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.28□□□□□ -0.44
Rfx3P48381 Gm33320-201ENSMUST00000192232 530 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Gm37714-201ENSMUST00000194742 342 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rfx3P48381 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.28□□□□□ -0.44
Rfx3P48381 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfx3P48381 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfx3P48381 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms