Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.46□□□□□ -0.41
Nkx2-2P42586 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.46□□□□□ -0.41
Nkx2-2P42586 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Gm28631-201ENSMUST00000190740 334 ntBASIC12.46□□□□□ -0.41
Nkx2-2P42586 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-2P42586 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.46□□□□□ -0.42
Nkx2-2P42586 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.42
Nkx2-2P42586 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.46□□□□□ -0.42
Nkx2-2P42586 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.46□□□□□ -0.42
Nkx2-2P42586 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.46□□□□□ -0.42
Nkx2-2P42586 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-2P42586 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm7488-201ENSMUST00000117148 684 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm38144-201ENSMUST00000192790 465 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm2423-201ENSMUST00000074863 733 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Acot6-202ENSMUST00000222921 3622 ntBASIC12.45□□□□□ -0.42
Nkx2-2P42586 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-2P42586 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.44□□□□□ -0.42
Nkx2-2P42586 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms