Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp9P41245 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.42□□□□□ -0.58
Mmp9P41245 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Mmp9P41245 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Mmp9P41245 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Mmp9P41245 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.41□□□□□ -0.58
Mmp9P41245 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Gm10154-201ENSMUST00000084445 354 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.41□□□□□ -0.58
Mmp9P41245 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Mmp9P41245 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Mmp9P41245 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp9P41245 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.4□□□□□ -0.58
Mmp9P41245 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.4□□□□□ -0.58
Mmp9P41245 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Mmp9P41245 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.4□□□□□ -0.58
Mmp9P41245 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.4□□□□□ -0.58
Mmp9P41245 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.4□□□□□ -0.58
Mmp9P41245 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp9P41245 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms