Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.15□□□□□ -0.3
Fv4P11370 Gm15770-201ENSMUST00000117498 584 ntBASIC13.15□□□□□ -0.3
Fv4P11370 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.15□□□□□ -0.3
Fv4P11370 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.15□□□□□ -0.3
Fv4P11370 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Fv4P11370 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fv4P11370 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.14□□□□□ -0.31
Fv4P11370 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm15240-201ENSMUST00000118156 720 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.14□□□□□ -0.31
Fv4P11370 Gm37935-201ENSMUST00000192012 982 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.14□□□□□ -0.31
Fv4P11370 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Fv4P11370 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fv4P11370 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Fv4P11370 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.13□□□□□ -0.31
Fv4P11370 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Fv4P11370 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.13□□□□□ -0.31
Fv4P11370 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms