Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm25700-201ENSMUST00000177693 110 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm19208-201ENSMUST00000213861 912 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a6B1AVK5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Gm13736-201ENSMUST00000119272 253 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Gm24514-201ENSMUST00000174961 285 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Mir7032-201ENSMUST00000185154 79 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Gm22058-201ENSMUST00000083393 310 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.67□□□□□ -0.22
Col4a6B1AVK5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm14277-201ENSMUST00000121195 360 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm8099-201ENSMUST00000200510 742 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm44262-201ENSMUST00000204969 372 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms