Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pramef20B1ARV6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gm6912-201ENSMUST00000117218 544 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gm15460-201ENSMUST00000118147 391 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gm43433-201ENSMUST00000196573 481 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gm18624-201ENSMUST00000220966 658 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pramef20B1ARV6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pramef20B1ARV6 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm12138-201ENSMUST00000122180 951 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Gm19220-201ENSMUST00000222682 803 ntBASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pramef20B1ARV6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pramef20B1ARV6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms