Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm13385-201ENSMUST00000121089 220 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm27321-201ENSMUST00000185021 205 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm9063-201ENSMUST00000223299 582 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm4875-201ENSMUST00000118257 786 ntBASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm7775-201ENSMUST00000218871 853 ntBASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms