Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm38225-201ENSMUST00000194001 393 ntBASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm45098-201ENSMUST00000207179 657 ntBASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm11745-201ENSMUST00000121669 448 ntBASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav6n-6A0A075B6B2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav6n-6A0A075B6B2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms