Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.12□□□□□ -0.47
Nubp2Q9R061 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.11□□□□□ -0.47
Nubp2Q9R061 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gm16215-201ENSMUST00000161990 637 ntBASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gm43703-201ENSMUST00000200523 763 ntBASIC12.11□□□□□ -0.47
Nubp2Q9R061 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.11□□□□□ -0.47
Nubp2Q9R061 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nubp2Q9R061 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Gm4875-201ENSMUST00000118257 786 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Gm24694-201ENSMUST00000180054 110 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Gm27663-201ENSMUST00000184839 110 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Gm2423-201ENSMUST00000074863 733 ntBASIC12.1□□□□□ -0.47
Nubp2Q9R061 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nubp2Q9R061 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms