Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Rtp4Q9ER80 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rtp4Q9ER80 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rtp4Q9ER80 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rtp4Q9ER80 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rtp4Q9ER80 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Gm18041-201ENSMUST00000218210 618 ntBASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rtp4Q9ER80 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Gm18187-201ENSMUST00000196476 984 ntBASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rtp4Q9ER80 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Gm19220-201ENSMUST00000222682 803 ntBASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.75□□□□□ -0.37
Rtp4Q9ER80 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rtp4Q9ER80 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms