Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm2213-201ENSMUST00000197485 688 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.87□□□□□ -0.35
Ska1Q9CPV1 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ska1Q9CPV1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.86□□□□□ -0.35
Ska1Q9CPV1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.86□□□□□ -0.35
Ska1Q9CPV1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms