Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tram1Q91V04 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.71□□□□□ -0.53
Tram1Q91V04 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Gm13597-201ENSMUST00000121239 375 ntBASIC11.71□□□□□ -0.53
Tram1Q91V04 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tram1Q91V04 AA619741-201ENSMUST00000195095 646 ntBASIC11.71□□□□□ -0.53
Tram1Q91V04 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tram1Q91V04 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tram1Q91V04 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.71□□□□□ -0.54
Tram1Q91V04 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.71□□□□□ -0.54
Tram1Q91V04 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tram1Q91V04 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.7□□□□□ -0.54
Tram1Q91V04 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.7□□□□□ -0.54
Tram1Q91V04 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm18737-201ENSMUST00000173594 937 ntBASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.7□□□□□ -0.54
Tram1Q91V04 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Tram1Q91V04 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tram1Q91V04 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms