Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Gm14057-201ENSMUST00000120631 482 ntBASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Top1mtQ8R4U6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Gm22189-201ENSMUST00000103822 86 ntBASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Gm5279-201ENSMUST00000199575 745 ntBASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.27■□□□□ 0.2
Top1mtQ8R4U6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Top1mtQ8R4U6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Top1mtQ8R4U6 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms