Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 AC155729.1-201ENSMUST00000227758 544 ntBASIC8.57□□□□□ -1.04
Cystm1Q8K353 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm8396-201ENSMUST00000057361 823 ntBASIC8.57□□□□□ -1.04
Cystm1Q8K353 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 AC154404.1-201ENSMUST00000223601 2077 ntBASIC8.57□□□□□ -1.04
Cystm1Q8K353 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm43102-201ENSMUST00000201004 2324 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm15427-201ENSMUST00000117288 531 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm8318-201ENSMUST00000182954 872 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Chchd1-203ENSMUST00000224633 557 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm38376-201ENSMUST00000195493 2253 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC8.56□□□□□ -1.04
Cystm1Q8K353 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.56□□□□□ -1.04
Cystm1Q8K353 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.55□□□□□ -1.04
Cystm1Q8K353 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cystm1Q8K353 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms