Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm18905-201ENSMUST00000205454 928 ntBASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm44855-201ENSMUST00000205725 362 ntBASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfwd3Q8CIK8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rfwd3Q8CIK8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rfwd3Q8CIK8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms