Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Gm11978-201ENSMUST00000122315 466 ntBASIC16.69■□□□□ 0.26
Trim52Q8CDV4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.69■□□□□ 0.26
Trim52Q8CDV4 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.69■□□□□ 0.26
Trim52Q8CDV4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim52Q8CDV4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Gm28693-202ENSMUST00000190758 331 ntBASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.68■□□□□ 0.26
Trim52Q8CDV4 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim52Q8CDV4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Gm14723-201ENSMUST00000118686 215 ntBASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim52Q8CDV4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Gm11591-201ENSMUST00000120063 702 ntBASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Gm16379-201ENSMUST00000161469 348 ntBASIC16.66■□□□□ 0.26
Trim52Q8CDV4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms