Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Vcpip1Q8CDG3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Vcpip1Q8CDG3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Mir698-201ENSMUST00000102164 109 ntBASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vcpip1Q8CDG3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms