Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd9Q8BYH8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm14005-208ENSMUST00000223654 681 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm10146-201ENSMUST00000072739 309 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm34023-201ENSMUST00000195539 217 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm26315-201ENSMUST00000083890 321 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms