Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam43aQ8BUP8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam43aQ8BUP8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam43aQ8BUP8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam43aQ8BUP8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.23■□□□□ 0.03
Fam43aQ8BUP8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms