Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm17330-201ENSMUST00000221047 165 ntBASIC13.79□□□□□ -0.2
Usp43Q8BUM9 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm24447-201ENSMUST00000083977 338 ntBASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp43Q8BUM9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Gm19078-201ENSMUST00000206311 727 ntBASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp43Q8BUM9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp43Q8BUM9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm7730-201ENSMUST00000212486 454 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm5161-201ENSMUST00000075243 853 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp43Q8BUM9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp43Q8BUM9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms