Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Mir877-201ENSMUST00000104738 85 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm17208-201ENSMUST00000168388 535 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm45186-201ENSMUST00000206874 478 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Morn2-202ENSMUST00000227729 656 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm20482-202ENSMUST00000174729 825 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm2383-201ENSMUST00000181461 807 ntBASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd4Q6PDQ2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Gm37489-201ENSMUST00000191883 159 ntBASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd4Q6PDQ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm23270-201ENSMUST00000104055 131 ntBASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd4Q6PDQ2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd4Q6PDQ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms