Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm8927-201ENSMUST00000181978 981 ntBASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm3222-201ENSMUST00000071282 990 ntBASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgb4Q6P8W9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Gm6244-201ENSMUST00000178732 841 ntBASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgb4Q6P8W9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgb4Q6P8W9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms