Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.43□□□□□ -0.26
Traf6P70196 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Traf6P70196 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Traf6P70196 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Traf6P70196 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Traf6P70196 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Traf6P70196 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.43□□□□□ -0.26
Traf6P70196 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Traf6P70196 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.42□□□□□ -0.26
Traf6P70196 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Traf6P70196 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Traf6P70196 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Gm13616-201ENSMUST00000120600 222 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Traf6P70196 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Mir6956-201ENSMUST00000183598 62 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Gm27533-201ENSMUST00000183800 152 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Gm27430-201ENSMUST00000184585 107 ntBASIC13.42□□□□□ -0.26
Traf6P70196 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.42□□□□□ -0.26
Traf6P70196 Gm10576-201ENSMUST00000191927 825 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Gm44333-201ENSMUST00000197168 107 ntBASIC13.42□□□□□ -0.26
Traf6P70196 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.42□□□□□ -0.26
Traf6P70196 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.42□□□□□ -0.26
Traf6P70196 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.42□□□□□ -0.26
Traf6P70196 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Traf6P70196 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Traf6P70196 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Traf6P70196 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Traf6P70196 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Traf6P70196 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Traf6P70196 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Traf6P70196 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.41□□□□□ -0.26
Traf6P70196 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Traf6P70196 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Traf6P70196 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.41□□□□□ -0.26
Traf6P70196 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.41□□□□□ -0.26
Traf6P70196 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.41□□□□□ -0.26
Traf6P70196 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.41□□□□□ -0.26
Traf6P70196 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.41□□□□□ -0.26
Traf6P70196 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Traf6P70196 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Traf6P70196 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.41□□□□□ -0.26
Traf6P70196 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.41□□□□□ -0.26
Traf6P70196 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms