Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Syt7-205ENSMUST00000224135 1557 ntBASIC12.38□□□□□ -0.43
Lsm3P62311 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lsm3P62311 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm3P62311 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm3P62311 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Lsm3P62311 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.37□□□□□ -0.43
Lsm3P62311 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm3P62311 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.37□□□□□ -0.43
Lsm3P62311 Gm16026-204ENSMUST00000162652 683 ntBASIC12.37□□□□□ -0.43
Lsm3P62311 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm3P62311 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm3P62311 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.37□□□□□ -0.43
Lsm3P62311 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.37□□□□□ -0.43
Lsm3P62311 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Lsm3P62311 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm3P62311 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm3P62311 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lsm3P62311 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm3P62311 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.36□□□□□ -0.43
Lsm3P62311 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms