Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.73□□□□□ -0.85
Cks1bP61025 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Cks1bP61025 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.72□□□□□ -0.85
Cks1bP61025 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.72□□□□□ -0.85
Cks1bP61025 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.72□□□□□ -0.85
Cks1bP61025 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Cks1bP61025 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gm25990-201ENSMUST00000102440 86 ntBASIC9.72□□□□□ -0.85
Cks1bP61025 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.72□□□□□ -0.85
Cks1bP61025 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.72□□□□□ -0.85
Cks1bP61025 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gm43347-201ENSMUST00000200226 580 ntBASIC9.72□□□□□ -0.85
Cks1bP61025 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.72□□□□□ -0.85
Cks1bP61025 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1bP61025 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1bP61025 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Cks1bP61025 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Cks1bP61025 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Cks1bP61025 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Cks1bP61025 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.71□□□□□ -0.85
Cks1bP61025 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1bP61025 Gm11764-201ENSMUST00000120221 623 ntBASIC9.71□□□□□ -0.86
Cks1bP61025 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Cks1bP61025 Gm15173-201ENSMUST00000122049 433 ntBASIC9.71□□□□□ -0.86
Cks1bP61025 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.71□□□□□ -0.86
Cks1bP61025 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.71□□□□□ -0.86
Cks1bP61025 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.71□□□□□ -0.86
Cks1bP61025 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cks1bP61025 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms