Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sssca1P56873 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11□□□□□ -0.65
Sssca1P56873 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sssca1P56873 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sssca1P56873 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11□□□□□ -0.65
Sssca1P56873 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sssca1P56873 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sssca1P56873 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11□□□□□ -0.65
Sssca1P56873 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11□□□□□ -0.65
Sssca1P56873 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.99□□□□□ -0.65
Sssca1P56873 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Gm27631-201ENSMUST00000184163 466 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.99□□□□□ -0.65
Sssca1P56873 Gm18049-201ENSMUST00000208909 581 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.99□□□□□ -0.65
Sssca1P56873 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sssca1P56873 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sssca1P56873 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sssca1P56873 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.98□□□□□ -0.65
Sssca1P56873 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.98□□□□□ -0.65
Sssca1P56873 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Sssca1P56873 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.98□□□□□ -0.65
Sssca1P56873 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.98□□□□□ -0.65
Sssca1P56873 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.98□□□□□ -0.65
Sssca1P56873 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.98□□□□□ -0.65
Sssca1P56873 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.98□□□□□ -0.65
Sssca1P56873 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.98□□□□□ -0.65
Sssca1P56873 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sssca1P56873 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.98□□□□□ -0.65
Sssca1P56873 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.98□□□□□ -0.65
Sssca1P56873 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.98□□□□□ -0.65
Sssca1P56873 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms