Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sox1P53783 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox1P53783 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox1P53783 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sox1P53783 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sox1P53783 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox1P53783 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.83□□□□□ -0.19
Sox1P53783 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox1P53783 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox1P53783 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox1P53783 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Sox1P53783 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Sox1P53783 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Sox1P53783 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.83□□□□□ -0.2
Sox1P53783 Gm13665-201ENSMUST00000120830 528 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox1P53783 Gm9540-201ENSMUST00000188230 478 ntBASIC13.83□□□□□ -0.2
Sox1P53783 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.83□□□□□ -0.2
Sox1P53783 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox1P53783 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sox1P53783 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sox1P53783 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.83□□□□□ -0.2
Sox1P53783 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox1P53783 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox1P53783 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.82□□□□□ -0.2
Sox1P53783 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.82□□□□□ -0.2
Sox1P53783 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sox1P53783 Gm14350-201ENSMUST00000116642 640 ntBASIC13.82□□□□□ -0.2
Sox1P53783 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox1P53783 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.82□□□□□ -0.2
Sox1P53783 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox1P53783 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox1P53783 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox1P53783 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox1P53783 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.81□□□□□ -0.2
Sox1P53783 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms