Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmx3P42581 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmx3P42581 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmx3P42581 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmx3P42581 Gm44492-201ENSMUST00000197012 141 ntBASIC11.4□□□□□ -0.58
Hmx3P42581 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.4□□□□□ -0.58
Hmx3P42581 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.4□□□□□ -0.58
Hmx3P42581 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hmx3P42581 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmx3P42581 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmx3P42581 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmx3P42581 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.4□□□□□ -0.59
Hmx3P42581 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.4□□□□□ -0.59
Hmx3P42581 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmx3P42581 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmx3P42581 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Hmx3P42581 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Matn2-203ENSMUST00000226766 3252 ntBASIC11.39□□□□□ -0.59
Hmx3P42581 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmx3P42581 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.39□□□□□ -0.59
Hmx3P42581 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.39□□□□□ -0.59
Hmx3P42581 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.39□□□□□ -0.59
Hmx3P42581 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmx3P42581 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmx3P42581 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Hmx3P42581 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Hmx3P42581 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.38□□□□□ -0.59
Hmx3P42581 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmx3P42581 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmx3P42581 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms