Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf11E9PZM7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC18.69■□□□□ 0.58
Scaf11E9PZM7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm4366-201ENSMUST00000201488 1342 ntBASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Snord83b-201ENSMUST00000104546 94 ntBASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm25700-201ENSMUST00000177693 110 ntBASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm27046-201ENSMUST00000182160 463 ntBASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Gm12500-202ENSMUST00000186471 2428 ntBASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Scaf11E9PZM7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm14109-201ENSMUST00000118814 309 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm26361-201ENSMUST00000158868 186 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm18393-201ENSMUST00000208349 1131 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.67■□□□□ 0.58
Scaf11E9PZM7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Gm2546-201ENSMUST00000182630 991 ntBASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scaf11E9PZM7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms