Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm13823-201ENSMUST00000119930 345 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm6222-201ENSMUST00000120787 396 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm10253-201ENSMUST00000194270 940 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm7774-201ENSMUST00000200064 533 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm5312-201ENSMUST00000203728 547 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim39Q9ESN2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gm14701-201ENSMUST00000117156 348 ntBASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim39Q9ESN2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms