Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Gm11543-201ENSMUST00000120758 370 ntBASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Gm18027-201ENSMUST00000218947 619 ntBASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd1lQ9CXF7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd1lQ9CXF7 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Mir497b-201ENSMUST00000093601 125 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd1lQ9CXF7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms