Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb4Q91XZ6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Paupar-201ENSMUST00000194826 3482 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm23935-201ENSMUST00000102303 57 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm24270-201ENSMUST00000102326 57 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm8410-201ENSMUST00000117225 605 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Mir1897-201ENSMUST00000122581 272 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm24245-201ENSMUST00000157318 57 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm37935-201ENSMUST00000192012 982 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm8396-201ENSMUST00000057361 823 ntBASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb4Q91XZ6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb4Q91XZ6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm26308-201ENSMUST00000157768 69 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm2445-201ENSMUST00000182798 989 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm27622-201ENSMUST00000183779 60 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm29741-201ENSMUST00000192667 421 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Shd-206ENSMUST00000225145 998 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms