Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm24420-201ENSMUST00000176676 59 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfwd3Q8CIK8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfwd3Q8CIK8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfwd3Q8CIK8 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.83□□□□□ -0.35
Rfwd3Q8CIK8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfwd3Q8CIK8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm9797-201ENSMUST00000052902 613 ntBASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfwd3Q8CIK8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms