Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Gm6244-201ENSMUST00000178732 841 ntBASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Gm27892-201ENSMUST00000185017 106 ntBASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Shisa4Q8CA71 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm4984-201ENSMUST00000115987 360 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm12957-201ENSMUST00000117835 377 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm13612-201ENSMUST00000119276 390 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.75■□□□□ 0.11
Shisa4Q8CA71 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shisa4Q8CA71 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Gm6447-201ENSMUST00000118905 835 ntBASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Proscos-202ENSMUST00000178990 666 ntBASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Gm10012-201ENSMUST00000078252 192 ntBASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shisa4Q8CA71 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.73■□□□□ 0.11
Shisa4Q8CA71 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms