Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tsen54Q8C2A2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm15427-201ENSMUST00000117288 531 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm16198-201ENSMUST00000118766 670 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm24513-201ENSMUST00000174964 138 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Tsen54Q8C2A2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Gm25911-201ENSMUST00000157621 56 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Gm27397-201ENSMUST00000184997 107 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tsen54Q8C2A2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms