Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rtl1Q7M732 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm11793-201ENSMUST00000120433 981 ntBASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm42693-201ENSMUST00000196779 631 ntBASIC23.96■■□□□ 1.43
Rtl1Q7M732 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm13369-201ENSMUST00000119442 987 ntBASIC23.96■■□□□ 1.43
Rtl1Q7M732 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Gm2639-201ENSMUST00000156881 1297 ntBASIC23.96■■□□□ 1.43
Rtl1Q7M732 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Rtl1Q7M732 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Rtl1Q7M732 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rtl1Q7M732 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Rtl1Q7M732 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Rtl1Q7M732 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm4782-201ENSMUST00000168705 2046 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Zkscan3-208ENSMUST00000224820 5398 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm11658-201ENSMUST00000120913 1008 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm2467-201ENSMUST00000182266 1010 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm6981-201ENSMUST00000182467 1008 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm29649-201ENSMUST00000185649 419 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rtl1Q7M732 n-R5s195-201ENSMUST00000082891 119 ntBASIC23.95■■□□□ 1.42
Rtl1Q7M732 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtl1Q7M732 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Snord83b-201ENSMUST00000104546 94 ntBASIC23.94■■□□□ 1.42
Rtl1Q7M732 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC23.94■■□□□ 1.42
Rtl1Q7M732 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 Gm5939-201ENSMUST00000119613 2874 ntBASIC23.94■■□□□ 1.42
Rtl1Q7M732 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtl1Q7M732 AC137842.1-201ENSMUST00000227896 2064 ntBASIC23.93■■□□□ 1.42
Rtl1Q7M732 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Rtl1Q7M732 AC238940.1-201ENSMUST00000225106 1858 ntBASIC23.93■■□□□ 1.42
Rtl1Q7M732 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtl1Q7M732 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms