Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fam196aQ3USH1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Fam196aQ3USH1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Fam196aQ3USH1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm14130-201ENSMUST00000118417 987 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm31256-201ENSMUST00000194705 506 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fam196aQ3USH1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm10434-201ENSMUST00000101158 471 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm14350-201ENSMUST00000116642 640 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm26956-201ENSMUST00000182176 986 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm37042-201ENSMUST00000193816 581 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm13097-201ENSMUST00000210722 397 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms