Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdh11P55288 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cdh11P55288 Gm14767-201ENSMUST00000121559 586 ntBASIC12.46□□□□□ -0.41
Cdh11P55288 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdh11P55288 Gm28630-201ENSMUST00000187806 498 ntBASIC12.46□□□□□ -0.41
Cdh11P55288 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.46□□□□□ -0.41
Cdh11P55288 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.46□□□□□ -0.41
Cdh11P55288 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.42
Cdh11P55288 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cdh11P55288 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Cdh11P55288 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.42
Cdh11P55288 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cdh11P55288 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh11P55288 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cdh11P55288 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cdh11P55288 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm13823-201ENSMUST00000119930 345 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm9719-201ENSMUST00000162765 543 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Gm10275-202ENSMUST00000168697 495 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Mir8102-201ENSMUST00000184148 139 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm10275-201ENSMUST00000092620 635 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdh11P55288 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Cdh11P55288 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.45□□□□□ -0.42
Cdh11P55288 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh11P55288 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Cdh11P55288 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh11P55288 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms