Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.18□□□□□ -0.3
Tnfsf4P43488 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.18□□□□□ -0.3
Tnfsf4P43488 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Gm15460-201ENSMUST00000118147 391 ntBASIC13.18□□□□□ -0.3
Tnfsf4P43488 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.18□□□□□ -0.3
Tnfsf4P43488 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf4P43488 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.17□□□□□ -0.3
Tnfsf4P43488 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Mir1897-201ENSMUST00000122581 272 ntBASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm21470-201ENSMUST00000187680 696 ntBASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.17□□□□□ -0.3
Tnfsf4P43488 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf4P43488 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm28630-201ENSMUST00000187806 498 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm10253-201ENSMUST00000194270 940 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm5779-201ENSMUST00000218467 910 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms