Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca1P41233 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.36□□□□□ -0.59
Abca1P41233 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Abca1P41233 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Gm19078-201ENSMUST00000206311 727 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Abca1P41233 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Gm24644-201ENSMUST00000157114 139 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.35□□□□□ -0.59
Abca1P41233 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Abca1P41233 Olfr582-201ENSMUST00000098212 960 ntBASIC11.35□□□□□ -0.59
Abca1P41233 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.35□□□□□ -0.59
Abca1P41233 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca1P41233 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.34□□□□□ -0.59
Abca1P41233 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.34□□□□□ -0.59
Abca1P41233 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.34□□□□□ -0.59
Abca1P41233 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.34□□□□□ -0.59
Abca1P41233 Gm27839-201ENSMUST00000184242 106 ntBASIC11.34□□□□□ -0.59
Abca1P41233 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.34□□□□□ -0.59
Abca1P41233 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.34□□□□□ -0.59
Abca1P41233 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Abca1P41233 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Abca1P41233 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.34□□□□□ -0.59
Abca1P41233 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Abca1P41233 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.34□□□□□ -0.59
Abca1P41233 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.34□□□□□ -0.59
Abca1P41233 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.34□□□□□ -0.59
Abca1P41233 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.34□□□□□ -0.59
Abca1P41233 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.34□□□□□ -0.59
Abca1P41233 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Abca1P41233 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms