Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm8856-201ENSMUST00000185254 1144 ntBASIC19.4■□□□□ 0.7
Kdm5cP41230 Ighv5-7-201ENSMUST00000192302 244 ntBASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm45224-201ENSMUST00000208203 414 ntBASIC19.4■□□□□ 0.7
Kdm5cP41230 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm6458-201ENSMUST00000211573 635 ntBASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kdm5cP41230 Gm8385-201ENSMUST00000058999 643 ntBASIC19.4■□□□□ 0.7
Kdm5cP41230 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Kdm5cP41230 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC19.39■□□□□ 0.69
Kdm5cP41230 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Kdm5cP41230 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.39■□□□□ 0.69
Kdm5cP41230 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC19.39■□□□□ 0.69
Kdm5cP41230 n-R5s14-201ENSMUST00000122688 107 ntBASIC19.39■□□□□ 0.69
Kdm5cP41230 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.39■□□□□ 0.69
Kdm5cP41230 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kdm5cP41230 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Kdm5cP41230 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Kdm5cP41230 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Kdm5cP41230 Gm27023-201ENSMUST00000182372 285 ntBASIC19.38■□□□□ 0.69
Kdm5cP41230 Gm18916-201ENSMUST00000198264 1246 ntBASIC19.38■□□□□ 0.69
Kdm5cP41230 AC161537.1-201ENSMUST00000226199 1015 ntBASIC19.38■□□□□ 0.69
Kdm5cP41230 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kdm5cP41230 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Kdm5cP41230 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC19.37■□□□□ 0.69
Kdm5cP41230 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC19.37■□□□□ 0.69
Kdm5cP41230 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC19.37■□□□□ 0.69
Kdm5cP41230 Gm7467-201ENSMUST00000185173 652 ntBASIC19.37■□□□□ 0.69
Kdm5cP41230 Gm3096-201ENSMUST00000185770 364 ntBASIC19.37■□□□□ 0.69
Kdm5cP41230 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC19.37■□□□□ 0.69
Kdm5cP41230 Gm45770-201ENSMUST00000212105 616 ntBASIC19.37■□□□□ 0.69
Kdm5cP41230 AC166095.1-201ENSMUST00000223731 1241 ntBASIC19.37■□□□□ 0.69
Kdm5cP41230 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Kdm5cP41230 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Kdm5cP41230 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kdm5cP41230 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.36■□□□□ 0.69
Kdm5cP41230 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC19.36■□□□□ 0.69
Kdm5cP41230 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Kdm5cP41230 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kdm5cP41230 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms