Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.8□□□□□ -0.36
RetP35546 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RetP35546 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.79□□□□□ -0.36
RetP35546 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.79□□□□□ -0.36
RetP35546 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RetP35546 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.79□□□□□ -0.36
RetP35546 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Mir6420-201ENSMUST00000185032 102 ntBASIC12.79□□□□□ -0.36
RetP35546 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.79□□□□□ -0.36
RetP35546 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.79□□□□□ -0.36
RetP35546 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RetP35546 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.79□□□□□ -0.36
RetP35546 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.79□□□□□ -0.36
RetP35546 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RetP35546 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RetP35546 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RetP35546 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RetP35546 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RetP35546 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.78□□□□□ -0.36
RetP35546 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.78□□□□□ -0.36
RetP35546 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.78□□□□□ -0.36
RetP35546 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RetP35546 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RetP35546 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RetP35546 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
RetP35546 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RetP35546 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RetP35546 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RetP35546 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RetP35546 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.77□□□□□ -0.36
RetP35546 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RetP35546 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RetP35546 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RetP35546 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RetP35546 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
RetP35546 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RetP35546 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RetP35546 Gm11425-201ENSMUST00000119608 498 ntBASIC12.77□□□□□ -0.37
RetP35546 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.77□□□□□ -0.37
RetP35546 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RetP35546 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms