Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc5P32043 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc5P32043 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc5P32043 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm15693-201ENSMUST00000120470 637 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm27533-201ENSMUST00000183800 152 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm33320-201ENSMUST00000192232 530 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm8396-201ENSMUST00000057361 823 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.68□□□□□ -0.38
Hoxc5P32043 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc5P32043 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc5P32043 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.67□□□□□ -0.38
Hoxc5P32043 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.67□□□□□ -0.38
Hoxc5P32043 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.67□□□□□ -0.38
Hoxc5P32043 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.67□□□□□ -0.38
Hoxc5P32043 Gm46209-201ENSMUST00000217912 553 ntBASIC12.67□□□□□ -0.38
Hoxc5P32043 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc5P32043 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc5P32043 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc5P32043 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.66□□□□□ -0.38
Hoxc5P32043 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc5P32043 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc5P32043 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms